SPI1

Last updated

SPI1
Protein SPI1 PDB 1pue.png
Available structures
PDB Ortholog search: PDBe RCSB
Identifiers
Aliases SPI1 , OF, PU.1, SFPI1, SPI-1, SPI-A, Spi-1 proto-oncogene, AGM10
External IDs OMIM: 165170; MGI: 98282; HomoloGene: 2346; GeneCards: SPI1; OMA:SPI1 - orthologs
Orthologs
SpeciesHumanMouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

NM_001080547
NM_003120

NM_011355
NM_001378898
NM_001378899

RefSeq (protein)

NP_001074016
NP_003111

NP_035485
NP_001365827
NP_001365828

Location (UCSC) Chr 11: 47.35 – 47.38 Mb Chr 2: 90.91 – 90.95 Mb
PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse

Transcription factor PU.1 is a protein that in humans is encoded by the SPI1 gene. [5]

Contents

Function

This gene encodes an ETS-domain transcription factor that activates gene expression during myeloid and B-lymphoid cell development. [6] The nuclear protein binds to a purine-rich sequence known as the PU-box found on enhancers of target genes, and regulates their expression in coordination with other transcription factors and cofactors. The protein can also regulate alternative splicing of target genes. Multiple transcript variants encoding different isoforms have been found for this gene. [7]

The PU.1 transcription factor is essential for hematopoiesis and cell fate decisions. PU.1 can physically interact with a variety of regulatory factors like SWI/SNF, [8] TFIID, GATA-2, GATA-1 and c-Jun. The protein-protein interactions between these factors can regulate PU.1-dependent cell fate decisions. PU.1 can modulate the expression of 3000 genes in hematopoietic cells including cytokines. It is expressed in monocytes, granulocytes, B and NK cells but is absent in T cells, reticulocytes and megakaryocytes. Its transcription is regulated by various mechanisms . [9]

PU.1 is an essential regulator of the pro-fibrotic system. In fibrotic conditions, PU.1 expression is perturbed in fibrotic diseases, resulting in upregulation of fibrosis-associated genes sets in fibroblasts. Disruption of PU.1 in fibrotic fibroblasts leads to them returning into their resting state from pro-fibrotic fibroblasts. PU.1 is seen to be highly expressed in extracellular matrix producing-fibrotic fibroblasts while it is downregulated in inflammatory/ ECM degrading and resting fibroblasts. The majority of the cells expressing PU.1 in fibrotic conditions remain to be fibroblasts with a few infiltrating lymphocytes. PU.1 induces the polarization of resting and inflammatory fibroblasts into fibrotic fibroblasts. [10]

Structure

The ETS domain is the DNA-binding module of PU.1 and other ETS-family transcription factors.

Interactions

SPI1 has been shown to interact with:

Related Research Articles

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References

  1. 1 2 3 GRCh38: Ensembl release 89: ENSG00000066336 Ensembl, May 2017
  2. 1 2 3 GRCm38: Ensembl release 89: ENSMUSG00000002111 Ensembl, May 2017
  3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. Ray D, Culine S, Tavitain A, Moreau-Gachelin F (May 1990). "The human homologue of the putative proto-oncogene Spi-1: characterization and expression in tumors". Oncogene. 5 (5): 663–668. PMID   1693183.
  6. Oikawa T, Yamada T, Kihara-Negishi F, Yamamoto H, Kondoh N, Hitomi Y, et al. (July 1999). "The role of Ets family transcription factor PU.1 in hematopoietic cell differentiation, proliferation and apoptosis". Cell Death and Differentiation. 6 (7): 599–608. doi: 10.1038/sj.cdd.4400534 . PMID   10453070.
  7. "Entrez Gene: SPI1 spleen focus forming virus (SFFV) proviral integration oncogene spi1".
  8. Chambers C, Cermakova K, Chan YS, Kurtz K, Wohlan K, Lewis AH, et al. (April 2023). "SWI/SNF Blockade Disrupts PU.1-Directed Enhancer Programs in Normal Hematopoietic Cells and Acute Myeloid Leukemia". Cancer Research. 83 (7): 983–996. doi:10.1158/0008-5472.CAN-22-2129. PMC   10071820 . PMID   36662812.
  9. Burda P, Laslo P, Stopka T (July 2010). "The role of PU.1 and GATA-1 transcription factors during normal and leukemogenic hematopoiesis". Leukemia. 24 (7): 1249–1257. doi:10.1038/leu.2010.104. PMID   20520638. S2CID   1941766.
  10. Wohlfahrt T, Rauber S, Uebe S, Luber M, Soare A, Ekici A, et al. (February 2019). "PU.1 controls fibroblast polarization and tissue fibrosis". Nature. 566 (7744): 344–349. Bibcode:2019Natur.566..344W. doi:10.1038/s41586-019-0896-x. PMC   6526281 . PMID   30700907.
  11. Hallier M, Lerga A, Barnache S, Tavitian A, Moreau-Gachelin F (February 1998). "The transcription factor Spi-1/PU.1 interacts with the potential splicing factor TLS". The Journal of Biological Chemistry. 273 (9): 4838–4842. doi: 10.1074/jbc.273.9.4838 . PMID   9478924.
  12. Zhang P, Behre G, Pan J, Iwama A, Wara-Aswapati N, Radomska HS, et al. (July 1999). "Negative cross-talk between hematopoietic regulators: GATA proteins repress PU.1". Proceedings of the National Academy of Sciences of the United States of America. 96 (15): 8705–8710. Bibcode:1999PNAS...96.8705Z. doi: 10.1073/pnas.96.15.8705 . PMC   17580 . PMID   10411939.
  13. Brass AL, Zhu AQ, Singh H (February 1999). "Assembly requirements of PU.1-Pip (IRF-4) activator complexes: inhibiting function in vivo using fused dimers". The EMBO Journal. 18 (4): 977–991. doi:10.1093/emboj/18.4.977. PMC   1171190 . PMID   10022840.
  14. Escalante CR, Shen L, Escalante MC, Brass AL, Edwards TA, Singh H, et al. (July 2002). "Crystallization and characterization of PU.1/IRF-4/DNA ternary complex". Journal of Structural Biology. 139 (1): 55–59. doi:10.1016/s1047-8477(02)00514-2. PMID   12372320.
  15. Hallier M, Tavitian A, Moreau-Gachelin F (May 1996). "The transcription factor Spi-1/PU.1 binds RNA and interferes with the RNA-binding protein p54nrb". The Journal of Biological Chemistry. 271 (19): 11177–11181. doi: 10.1074/jbc.271.19.11177 . PMID   8626664.

Further reading